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Packages that use ImageStack | |
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ij | |
ij.plugin | |
ij.plugin.filter | |
ij.process |
Uses of ImageStack in ij |
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Subclasses of ImageStack in ij | |
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class |
VirtualStack
This class represents an array of disk-resident images. |
Methods in ij that return ImageStack | |
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ImageStack |
ImagePlus.createEmptyStack()
Returns an empty image stack that has the same width, height and color table as this image. |
ImageStack |
ImagePlus.getImageStack()
Returns the base image stack. |
ImageStack |
ImagePlus.getStack()
Returns the image stack. |
Methods in ij with parameters of type ImageStack | |
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void |
ImagePlus.setStack(ImageStack stack)
Replaces the image with the specified stack and updates the display. |
void |
ImagePlus.setStack(ImageStack stack,
int nChannels,
int nSlices,
int nFrames)
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void |
ImagePlus.setStack(java.lang.String title,
ImageStack stack)
Replaces the image with the specified stack and updates the display. |
Constructors in ij with parameters of type ImageStack | |
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ImagePlus(java.lang.String title,
ImageStack stack)
Constructs an ImagePlus from a stack. |
Uses of ImageStack in ij.plugin |
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Subclasses of ImageStack in ij.plugin | |
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class |
AVI_Reader
ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame) Version 2008-07-03 by Michael Schmid, based on a plugin by Daniel Marsh and Wayne Rasband Restrictions and Notes: - Only few formats supported: - uncompressed 8 bit with palette (=LUT) - uncompressed 8 & 16 bit grayscale - uncompressed 24 & 32 bit RGB (alpha channel ignored) - uncompressed 32 bit AYUV (alpha channel ignored) - various YUV 4:2:2 compressed formats - png or jpeg-encoded individual frames. |
class |
FileInfoVirtualStack
This plugin opens a multi-page TIFF file as a virtual stack. |
class |
ListVirtualStack
This plugin opens images specified by list of file paths as a virtual stack. |
Methods in ij.plugin that return ImageStack | |
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ImageStack |
StackCombiner.combineHorizontally(ImageStack stack1,
ImageStack stack2)
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ImageStack |
StackCombiner.combineVertically(ImageStack stack1,
ImageStack stack2)
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ImageStack |
CanvasResizer.expandStack(ImageStack stackOld,
int wNew,
int hNew,
int xOff,
int yOff)
|
ImageStack |
AVI_Reader.makeStack(java.lang.String path,
int firstFrameNumber,
int lastFrameNumber,
boolean isVirtual,
boolean convertToGray,
boolean flipVertical)
Create an ImageStack from an avi file with given path. |
ImageStack |
RGBStackMerge.mergeStacks(int w,
int h,
int d,
ImageStack red,
ImageStack green,
ImageStack blue,
boolean keep)
|
ImageStack |
PGM_Reader.openFile(java.lang.String path)
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ImageStack |
DICOM_Sorter.sort(ImageStack stack)
|
ImageStack |
Straightener.straightenStack(ImagePlus imp,
Roi roi,
int width)
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Methods in ij.plugin with parameters of type ImageStack | |
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ImageStack |
StackCombiner.combineHorizontally(ImageStack stack1,
ImageStack stack2)
|
ImageStack |
StackCombiner.combineVertically(ImageStack stack1,
ImageStack stack2)
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ImagePlus |
RGBStackMerge.createComposite(int w,
int h,
int d,
ImageStack[] stacks,
boolean keep)
|
ImageStack |
CanvasResizer.expandStack(ImageStack stackOld,
int wNew,
int hNew,
int xOff,
int yOff)
|
ImageStack |
RGBStackMerge.mergeStacks(int w,
int h,
int d,
ImageStack red,
ImageStack green,
ImageStack blue,
boolean keep)
|
ImageStack |
DICOM_Sorter.sort(ImageStack stack)
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Uses of ImageStack in ij.plugin.filter |
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Fields in ij.plugin.filter declared as ImageStack | |
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ImageStack |
RGBStackSplitter.blue
These are the three stacks created by the split(ImageStack) method. |
ImageStack |
RGBStackSplitter.green
These are the three stacks created by the split(ImageStack) method. |
ImageStack |
RGBStackSplitter.red
These are the three stacks created by the split(ImageStack) method. |
Methods in ij.plugin.filter with parameters of type ImageStack | |
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void |
Projector.getByteRow(ImageStack stack,
int x,
int y,
int z,
int width1,
int width2,
int[] line)
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void |
Projector.getRGBRow(ImageStack stack,
int x,
int y,
int z,
int width1,
int width2,
int[] line)
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void |
Projector.putByteRow(ImageStack stack,
int y,
int z,
int width,
int[] line)
|
void |
Projector.putRGBRow(ImageStack stack,
int y,
int z,
int width,
int[] line)
|
void |
RGBStackSplitter.split(ImageStack rgb,
boolean keepSource)
Splits the specified RGB stack into three 8-bit grayscale stacks. |
Uses of ImageStack in ij.process |
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Methods in ij.process that return ImageStack | |
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ImageStack |
StackProcessor.crop(int x,
int y,
int width,
int height)
Crops the stack to the specified rectangle. |
ImageStack |
FHT.getComplexTransform()
Converts this FHT to a complex Fourier transform and returns it as a two slice stack. |
ImageStack |
ColorProcessor.getHSBStack()
Returns an ImageStack with three 8-bit slices, representing hue, saturation and brightness |
ImageStack |
StackProcessor.resize(int newWidth,
int newHeight)
Creates a new stack with dimensions 'newWidth' x 'newHeight'. |
ImageStack |
StackProcessor.rotateLeft()
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ImageStack |
StackProcessor.rotateRight()
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Methods in ij.process with parameters of type ImageStack | |
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void |
StackProcessor.copyBits(ImageStack src,
int xloc,
int yloc,
int mode)
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Constructors in ij.process with parameters of type ImageStack | |
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StackProcessor(ImageStack stack,
ImageProcessor ip)
Constructs a StackProcessor from a stack. |
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