Uses of Class
ij.ImageStack

Packages that use ImageStack
ij   
ij.plugin   
ij.plugin.filter   
ij.process   
 

Uses of ImageStack in ij
 

Subclasses of ImageStack in ij
 class VirtualStack
          This class represents an array of disk-resident images.
 

Methods in ij that return ImageStack
 ImageStack ImagePlus.createEmptyStack()
          Returns an empty image stack that has the same width, height and color table as this image.
 ImageStack ImagePlus.getImageStack()
          Returns the base image stack.
 ImageStack ImagePlus.getStack()
          Returns the image stack.
 

Methods in ij with parameters of type ImageStack
 void ImagePlus.setStack(ImageStack stack)
          Replaces the image with the specified stack and updates the display.
 void ImagePlus.setStack(ImageStack stack, int nChannels, int nSlices, int nFrames)
           
 void ImagePlus.setStack(java.lang.String title, ImageStack stack)
          Replaces the image with the specified stack and updates the display.
 

Constructors in ij with parameters of type ImageStack
ImagePlus(java.lang.String title, ImageStack stack)
          Constructs an ImagePlus from a stack.
 

Uses of ImageStack in ij.plugin
 

Subclasses of ImageStack in ij.plugin
 class AVI_Reader
           ImageJ Plugin for reading an AVI file into an image stack (one slice per video frame) Version 2008-07-03 by Michael Schmid, based on a plugin by Daniel Marsh and Wayne Rasband Restrictions and Notes: - Only few formats supported: - uncompressed 8 bit with palette (=LUT) - uncompressed 8 & 16 bit grayscale - uncompressed 24 & 32 bit RGB (alpha channel ignored) - uncompressed 32 bit AYUV (alpha channel ignored) - various YUV 4:2:2 compressed formats - png or jpeg-encoded individual frames.
 class FileInfoVirtualStack
          This plugin opens a multi-page TIFF file as a virtual stack.
 class ListVirtualStack
          This plugin opens images specified by list of file paths as a virtual stack.
 

Methods in ij.plugin that return ImageStack
 ImageStack StackCombiner.combineHorizontally(ImageStack stack1, ImageStack stack2)
           
 ImageStack StackCombiner.combineVertically(ImageStack stack1, ImageStack stack2)
           
 ImageStack CanvasResizer.expandStack(ImageStack stackOld, int wNew, int hNew, int xOff, int yOff)
           
 ImageStack AVI_Reader.makeStack(java.lang.String path, int firstFrameNumber, int lastFrameNumber, boolean isVirtual, boolean convertToGray, boolean flipVertical)
          Create an ImageStack from an avi file with given path.
 ImageStack RGBStackMerge.mergeStacks(int w, int h, int d, ImageStack red, ImageStack green, ImageStack blue, boolean keep)
           
 ImageStack PGM_Reader.openFile(java.lang.String path)
           
 ImageStack DICOM_Sorter.sort(ImageStack stack)
           
 ImageStack Straightener.straightenStack(ImagePlus imp, Roi roi, int width)
           
 

Methods in ij.plugin with parameters of type ImageStack
 ImageStack StackCombiner.combineHorizontally(ImageStack stack1, ImageStack stack2)
           
 ImageStack StackCombiner.combineVertically(ImageStack stack1, ImageStack stack2)
           
 ImagePlus RGBStackMerge.createComposite(int w, int h, int d, ImageStack[] stacks, boolean keep)
           
 ImageStack CanvasResizer.expandStack(ImageStack stackOld, int wNew, int hNew, int xOff, int yOff)
           
 ImageStack RGBStackMerge.mergeStacks(int w, int h, int d, ImageStack red, ImageStack green, ImageStack blue, boolean keep)
           
 ImageStack DICOM_Sorter.sort(ImageStack stack)
           
 

Uses of ImageStack in ij.plugin.filter
 

Fields in ij.plugin.filter declared as ImageStack
 ImageStack RGBStackSplitter.blue
          These are the three stacks created by the split(ImageStack) method.
 ImageStack RGBStackSplitter.green
          These are the three stacks created by the split(ImageStack) method.
 ImageStack RGBStackSplitter.red
          These are the three stacks created by the split(ImageStack) method.
 

Methods in ij.plugin.filter with parameters of type ImageStack
 void Projector.getByteRow(ImageStack stack, int x, int y, int z, int width1, int width2, int[] line)
           
 void Projector.getRGBRow(ImageStack stack, int x, int y, int z, int width1, int width2, int[] line)
           
 void Projector.putByteRow(ImageStack stack, int y, int z, int width, int[] line)
           
 void Projector.putRGBRow(ImageStack stack, int y, int z, int width, int[] line)
           
 void RGBStackSplitter.split(ImageStack rgb, boolean keepSource)
          Splits the specified RGB stack into three 8-bit grayscale stacks.
 

Uses of ImageStack in ij.process
 

Methods in ij.process that return ImageStack
 ImageStack StackProcessor.crop(int x, int y, int width, int height)
          Crops the stack to the specified rectangle.
 ImageStack FHT.getComplexTransform()
          Converts this FHT to a complex Fourier transform and returns it as a two slice stack.
 ImageStack ColorProcessor.getHSBStack()
          Returns an ImageStack with three 8-bit slices, representing hue, saturation and brightness
 ImageStack StackProcessor.resize(int newWidth, int newHeight)
          Creates a new stack with dimensions 'newWidth' x 'newHeight'.
 ImageStack StackProcessor.rotateLeft()
           
 ImageStack StackProcessor.rotateRight()
           
 

Methods in ij.process with parameters of type ImageStack
 void StackProcessor.copyBits(ImageStack src, int xloc, int yloc, int mode)
           
 

Constructors in ij.process with parameters of type ImageStack
StackProcessor(ImageStack stack, ImageProcessor ip)
          Constructs a StackProcessor from a stack.